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NOT (\"Letter\"[pt] OR \"Comment\"[pt] OR \"Editorial\"[pt] OR \"Review\"[pt] OR \"Systematic Review\"[pt] OR \"Scoping Review\"[pt] OR \"News\"[pt] OR \"Newspaper Article\"[pt] OR \"Published Erratum\"[pt] OR \"Retraction Notice\"[pt] OR \"Retracted Publication\"[pt] OR \"Expression of Concern\"[pt] OR \"Case Reports\"[pt] OR \"Practice Guideline\"[pt] OR \"Guideline\"[pt] OR \"Interview\"[pt] OR \"Biography\"[pt] OR \"Portrait\"[pt] OR \"Autobiography\"[pt] OR \"Personal Narrative\"[pt] OR \"Lecture\"[pt] OR \"Address\"[pt] OR \"Introductory Journal Article\"[pt] OR \"Clinical Conference\"[pt])", "received_to_accepted": { "median": 145, "n": 267, "p25": 115, "p75": 190 }, "record_exclusion_counts": { "front_matter_no_abstract": 29, "front_matter_under_4_printed_pages": 4 }, "retrieval_completed_at": "2026-10-01T17:48:45.788525+00:00", "sample_seed": "20261001|0372537|2024-01-01|2025-12-31", "sampled_n": 300, "slug": "brain", "unusable_dated_fraction": 0, "window": "current", 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"original_hold_status": "compared", "slug": "american-journal-of-human-genetics" }, { "baseline": { "median": 126, "n": 294, "p25": 95, "p75": 166 }, "baseline_deposit_rate": 1, "change_days": -5.5, "change_pct": -4.36507936507936, "current": { "median": 120.5, "n": 290, "p25": 81, "p75": 160.8 }, "current_deposit_rate": 0.9897610921501706, "eligibility": "eligible", "exclusion_reasons": [], "family": "Other", "journal": "The ISME Journal", "original_hold_status": "compared", "slug": "the-isme-journal" }, { "baseline": { "median": 85, "n": 299, "p25": 56, "p75": 119.5 }, "baseline_deposit_rate": 1, "change_days": 8, "change_pct": 9.411764705882364, "current": { "median": 93, "n": 300, "p25": 67, "p75": 129.2 }, "current_deposit_rate": 1, "eligibility": "eligible", "exclusion_reasons": [], "family": "Other", "journal": "The Science of The Total Environment", "original_hold_status": "compared", "slug": "science-of-the-total-environment" }, { "baseline": { "median": 132, "n": 299, "p25": 93, "p75": 174.5 }, "baseline_deposit_rate": 1, "change_days": -11.5, "change_pct": -8.712121212121215, "current": { "median": 120.5, "n": 300, "p25": 91, "p75": 166.2 }, "current_deposit_rate": 1, "eligibility": "eligible", "exclusion_reasons": [], "family": "Other", "journal": "Waste Management", "original_hold_status": "compared", "slug": "waste-management" }, { "baseline": { "median": 113, "n": 299, "p25": 88, "p75": 146 }, "baseline_deposit_rate": 0.9966666666666668, "change_days": -23, "change_pct": -20.353982300884955, "current": { "median": 90, "n": 299, "p25": 69, "p75": 124.5 }, "current_deposit_rate": 1, "eligibility": "eligible", "exclusion_reasons": [], "family": "Other", "journal": "Water Research", "original_hold_status": "compared", "slug": "water-research" } ], "panel_selection": "Original published panel, fixed before new draw; purposive commercial journal selection; Manusights commercial affiliation", "runtime": { "draw_note": "Frozen PMID draws are authoritative; a seed alone does not guarantee Random.sample parity across Python versions", "implementation": "CPython", "python_version": "3.14.6 (main, Jun 10 2026, 10:03:53) [Clang 17.0.0 (clang-1700.6.4.2)]" }, "seed": 20261001, "status": "Released", "trend": { "all_fresh_eligible_pairs": { "baseline_median_of_journal_medians": 111, "ci95": [ 9.411764705882364, 41.50943396226414 ], "current_median_of_journal_medians": 127.5, "faster": 19, "journals": 65, "median_change_days": 30.5, "median_change_pct": 32.45033112582782, "slower": 45, "ties": 1 }, "deposit_at_least_90pct_both": { "baseline_median_of_journal_medians": 105, "ci95": [ 8.558558558558559, 41.50943396226414 ], "current_median_of_journal_medians": 120.5, "faster": 18, "journals": 61, "median_change_days": 30, "median_change_pct": 31.443298969072163, "slower": 42, "ties": 1 }, "exclude_cell_press": { "baseline_median_of_journal_medians": 105, "ci95": [ 2.857142857142847, 35.570469798657726 ], "current_median_of_journal_medians": 119.5, "faster": 19, "journals": 55, "median_change_days": 13.5, "median_change_pct": 13.793103448275868, "slower": 35, "ties": 1 }, "exclude_mdpi": { "baseline_median_of_journal_medians": 115.5, "ci95": [ 13.793103448275868, 45.60669456066946 ], "current_median_of_journal_medians": 136, "faster": 14, "journals": 60, "median_change_days": 32.75, "median_change_pct": 35.15392254220456, "slower": 45, "ties": 1 }, "n_at_least_200_both": { "baseline_median_of_journal_medians": 107, "ci95": [ 8.096073172409046, 41.024987251402344 ], "current_median_of_journal_medians": 120.5, "faster": 17, "journals": 56, "median_change_days": 25.75, "median_change_pct": 26.316908682179964, "slower": 38, "ties": 1 }, "remove_original_five_held": { "baseline_median_of_journal_medians": 113.5, "ci95": [ 8.060791884321294, 38.05550516959914 ], "current_median_of_journal_medians": 124.5, "faster": 19, "journals": 60, "median_change_days": 28.5, "median_change_pct": 23.455106482629414, "slower": 40, "ties": 1 } }, "upper_bound_sensitivity": [ { "cap_days": 730, "journals": 104, "measured": 27095, "median_of_journal_medians": 153 }, { "cap_days": 1095, "journals": 104, "measured": 27254, "median_of_journal_medians": 153 }, { "cap_days": 1825, "journals": 104, "measured": 27286, "median_of_journal_medians": 153 } ], "version": "2026.2", "citation": "Manusights (2026). Journal acceptance times from PubMed history dates, 2026 edition (Version 2026.2) [Data set]. Zenodo. https://doi.org/10.5281/zenodo.23131431. Commercial affiliation: Manusights provides manuscript review services. The original 2026.1 release remains archived at https://doi.org/10.5281/zenodo.23001076.", "codebook": [ { "field": "received_to_accepted", "definition": "n, median and type-7 p25/p75 for 1–1825-day publisher-deposited received→accepted intervals; includes author revisions, published survivors only." }, { "field": "frame_n / sampled_n / front_matter_n / eligible_type_n / both_dates_n", "definition": "Complete query UID count; uniformly drawn/fetched count; research-typed records excluded as front matter (no abstract, or a printed page range under 4 pages); count passing the operational PubMed type rule and not front matter; count of those with both dates before interval exclusion. These denominators are distinct." }, { "field": "deposit_rate", "definition": "both_dates_n / eligible_type_n, where eligible_type_n excludes front matter. Missingness may reflect imperfect content typing. Not PubMed/Crossref coverage." }, { "field": "record_exclusion_counts / dated_interval_exclusion_counts / quality_flags", "definition": "Every sampled-record exclusion is counted; same-day, negative and over-1825 intervals are separate. Distinct received/accepted values are excluded as ambiguous without selecting a favourable date. Completeness does not establish accurate history semantics. A ≥10% unusable-dated fraction is an exploratory QA flag, not a new exclusion." }, { "field": "pubmed_coverage_raw_original_snapshot", "definition": "Original snapshot ratio of all-type PubMed count to Crossref journal-article count, before supplement adjustment. Not a matched-DOI fraction or a new-harvest coverage estimate." }, { "field": "pubmed_coverage_adjusted_original_snapshot", "definition": "Separate original ratio after a random n100 Crossref supplement-share adjustment; null if unadjusted. The main current summary excludes the three adjusted-only rows; its inclusive sensitivity retains them." }, { "field": "eligibility / main_current_eligible / exclusion_reasons", "definition": "Fresh n≥30, date deposit≥0.60, mismatch≤0.05; current main panel additionally uses original unadjusted ratio≥0.80. Every row and removal remains visible." }, { "field": "query / window_start / window_end", "definition": "Exact PubMed [dp] cohort definition. Print/electronic/year-only dates can match; not a verified exact online-publication cohort." }, { "field": "sample_seed / frame_sha256 / retrieval_completed_at", "definition": "Exact deterministic draw seed, comma-joined sorted full-frame checksum and UTC completion time. Raw query/fetch responses are frozen separately." }, { "field": "original_median / original_n / original_p25 / original_p75", "definition": "Archived v2 sample statistics, retained for before/after comparison. The v3 values use a fresh draw and current metadata, so changes are not purely a bug-repair effect." }, { "field": "original_hold_status", "definition": "Fixed pre-existing historical diagnostic flag. Inclusive paired analysis retains flagged pairs; the named sensitivity excludes the original five. A jump is not proof of changed deposited-date meaning." }, { "field": "change_pct / change_days", "definition": "Within-journal change between new 2014–2015 and 2024–2025 query cohorts. Percentage is unrounded for 10,000 journal bootstrap resamples, seed20261001. Not a global or causal trend." } ] }