Step 1
Agree on ownership before importing
Choose a reference manager around the team's writing environment, institutional access and collaboration needs. A familiar interface is not enough if a co-author cannot edit the working document.
- Set one working system
- Name the library owner, the authoritative collection, the shared-document location and the person responsible for a final reference check. Test access with a second author.
- Run a small handoff test
- Import several different source types, insert citations in the actual writing tool, change a record and refresh the bibliography. Test an export and re-import before relying on a migration path.
Step 2
Fix records without collapsing distinct works
Zotero's duplicate detector identifies candidates within a library. Its merge action retains information used by collections and citation plugins; deleting a candidate is not equivalent.
- Inspect before merging
- Check title, authors, DOI, publication type and version. A preprint and a journal article, or a study report and its correction, may be related but distinct records.
- Separate metadata from support
- Correct bibliographic fields against the source. Separately read whether the source supports the manuscript's actual claim, population and degree of certainty. A resolving DOI does not perform that check.
Check the source
- Zotero: Duplicate Detection · Merging duplicates
Step 3
A realistic failure: the citation is valid, the claim is not
Fictional example: a draft says a treatment improves survival, but its reference describes only a laboratory response. Updating the citation style leaves the scientific mismatch untouched.
- Repair the statement
- Find support for the intended clinical claim or narrow the sentence to what the source actually studied. Do not substitute a more impressive-looking reference without reading it.
- Record the choice
- Keep a short note linking the manuscript sentence to the checked source and version. Make uncertain or disputed claims visible to the responsible co-author.
Step 4
Separate sync, backup and the submission copy
Zotero distinguishes record-data sync from attachment-file sync and synchronizes changes in both directions. It warns against placing its live data directory in a cloud-sync folder.
- Verify recovery, not just synchronization
- Follow the chosen tool's backup instructions. Test recovery on a safe copy, never the only working library. Check whether attachments and annotations are included in the team's handoff.
- Freeze an identifiable submission set
- Save the submitted manuscript version, the relevant reference export and the source-check record in an approved location. Verify citation fields still work in the editable master; do not unlink the only copy for a one-time formatting request.
Check the source
- Zotero: Syncing · Data syncing; File syncing; Alternative Syncing Solutions